CXCR4_site_01 | SCGE Toolkit

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SCGE ID	10000000139
Lab ID	CXCR4_site_01
Source	lab IVT
Target Locus	CXCR4
Species	human
Description	Targets endogenous human locus
Guide Compatibility	SpyCas9

Target Sequence	GATAACTACACCGAGGAAAT
Target Sequence + PAM	GATAACTACACCGAGGAAATNGG
Position	hg38/chr2:136115877-136115900

Spacer Sequence	GAUAACUACACCGAGGAAAU
Spacer Length	20
Modifications	none

Forward Primer	TGGAGTAGATGGTGGGCAGGAAGA
Reverse Primer	ATTCTCTTGTGCCCTTAGCCCAC

Ivt Construct Source	Addgene
Vector Id	153997
Vector Name	pCRL01
Vector Description	Plasmid for single guide RNA IVT
Vector Type	plasmid
Annotated Map	addgene-plasmid-153997-sequence-304516

Detection Method	No. of sites detected
Change-seq	190
Guide-seq	5

Specificity Ratio	0.166

Publication Title
CHANGE-seq reveals genetic and epigenetic effects on CRISPR-Cas9 genome-wide activity. NCBI

This Guide: CXCR4_site_01 is being used ...

Project	Initiative	Contact PI
A Novel Human T-Cell Platform to Define Biological Effects of Genome Editing Experiments A novel human T cell platform to define biological adverse effects of genome editing	Biological Effects	Shengdar Q Tsai, PhD (St. Jude Children's Research Hospital)