TRAC_site_03 | SCGE Toolkit

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Summary Sequence Viewer Related Editors Vector Off Targets Projects & Experiments

SCGE ID	10000000194
Lab ID	TRAC_site_03
Source	lab IVT
Target Locus	TRAC
Species	human
Description	Targets endogenous human locus
Guide Compatibility	SpyCas9

Target Sequence	GAGAATCAAAATCGGTGAAT
Target Sequence + PAM	GAGAATCAAAATCGGTGAATNGG
Position	hg38/chr14:22547572-22547595

Spacer Sequence	GAGAAUCAAAAUCGGUGAAU
Spacer Length	20
Modifications	none

Forward Primer	GCCTGGGTTGGGGCAAAGAGGGA
Reverse Primer	GTTGCTCCAGGCCACAGCACTGT

Ivt Construct Source	Addgene
Vector Id	153997
Vector Name	pCRL01
Vector Description	Plasmid for single guide RNA IVT
Vector Type	plasmid
Annotated Map	addgene-plasmid-153997-sequence-304516

Detection Method	No. of sites detected
Change-seq	118
Guide-seq	2

Specificity Ratio	0.212

Publication Title
CHANGE-seq reveals genetic and epigenetic effects on CRISPR-Cas9 genome-wide activity. NCBI

This Guide: TRAC_site_03 is being used ...

Project	Initiative	Contact PI
A Novel Human T-Cell Platform to Define Biological Effects of Genome Editing Experiments A novel human T cell platform to define biological adverse effects of genome editing	Biological Effects	Shengdar Q Tsai, PhD (St. Jude Children's Research Hospital)