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ExperimentOn-target editing compared to 14 circle-seq nominated off-target sites of adenine base editor delivered by BE-eVLP vs AAV in the C57BL/6 liver
Experiment ConditionOnTarget-AAV
Assay Description: adenine base editing at target Pcsk9 site in liver vs. other mouse organs (heart, kidney, lung, muscle, spleen)
Tissue Measured:liver
Measurement Type:Editing Efficiency
Record ID15000001547

EditorTadA-8e V106W
Delivery System
Delivery System Subtype
Guide
VectorAAV-Pcsk9;

Model SpeciesMouse
Model NameC57BL/6J

Application Methodretro-orbital (intravenous)
Application Siteliver
Dosage1E11 vg
Injection Frequency1x
Injection Rate
Injection Volume120 ul
Days post injection1 week
Editor FormatAAV
Antidote Id
Antidote Description

Measured Values
Samples Size: 5
 
Replicate Result (Editing Efficiency)
Measurement Units: % of total sequencing reads with AT converted to GC
Mean 57.21 
1 56.7267032 
2 58.9583333 
3 61.2446992 
4 55.0830526 
5 54.0576002 
  

Title Description File Download SCGE ID
Chaikof-Associated Protocol 2_Off-target editing AND Primers for sequencing analysis This protocol describes in vivo adminstration and subsequent analysis of off-target editing in the liver. Chaikof-Associated Protocol 2_Off-target editing AND Primers for sequencing analysis.pdf 21000000033